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CTDNEP1 CTD nuclear envelope phosphatase 1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102385568, updated on 10-Mar-2024

Summary

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Gene symbol
CTDNEP1
Gene description
CTD nuclear envelope phosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005843097.1 (50842..57803, complement)

NW_005843097.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 23 Neighboring gene GABA type A receptor-associated protein Neighboring gene elongator acetyltransferase complex subunit 5 Neighboring gene claudin 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005843097 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CTD nuclear envelope phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005843097.1 Reference ASM45574v1 Primary Assembly

    Range
    50842..57803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006037298.2 → XP_006037360.1  CTD nuclear envelope phosphatase 1 isoform X2

    UniProtKB/TrEMBL
    A0A1U7SGI8
    Conserved Domains (1) summary
    TIGR02251
    Location:58 → 226
    HIF-SF_euk; Dullard-like phosphatase domain

  2. XM_014526642.2 → XP_014382128.1  CTD nuclear envelope phosphatase 1 isoform X3

    UniProtKB/TrEMBL
    A0A1U8DLL3
    Conserved Domains (1) summary
    cl21460
    Location:61 → 190
    HAD_like; Haloacid Dehalogenase-like Hydrolases

  3. XM_006037299.2 → XP_006037361.1  CTD nuclear envelope phosphatase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1U7SSU6
    Conserved Domains (1) summary
    TIGR02251
    Location:61 → 229
    HIF-SF_euk; Dullard-like phosphatase domain
Nucleotide Protein
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