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SYT15 synaptotagmin 15 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102378147, updated on 10-Mar-2024

Summary

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Gene symbol
SYT15
Gene description
synaptotagmin 15
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842383.1 (1025495..1050050)

NW_005842383.1Genomic Context describing neighboring genes Neighboring gene elastase-1-like Neighboring gene nuclear receptor coactivator 4 Neighboring gene G protein regulated inducer of neurite outgrowth 2 Neighboring gene shieldin complex subunit 2 Neighboring gene glutamate dehydrogenase 1 Neighboring gene uncharacterized LOC102375718

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842383 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylserine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-ion regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of calcium ion-dependent exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dopamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842383.1 Reference ASM45574v1 Primary Assembly

    Range
    1025495..1050050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025210978.1 → XP_025066763.1  synaptotagmin-15 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0H8J0
    Conserved Domains (2) summary
    cd08390
    Location:151 → 271
    C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
    cd08409
    Location:281 → 417
    C2B_Synaptotagmin-15; C2 domain second repeat present in Synaptotagmin 15

  2. XM_025210977.1 → XP_025066762.1  synaptotagmin-15 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0H552
    Conserved Domains (2) summary
    cd08390
    Location:154 → 274
    C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
    cd08409
    Location:284 → 420
    C2B_Synaptotagmin-15; C2 domain second repeat present in Synaptotagmin 15

  3. XM_025210979.1 → XP_025066764.1  synaptotagmin-15 isoform X3

    UniProtKB/TrEMBL
    A0A3Q0H3Y0
    Conserved Domains (2) summary
    cd08409
    Location:227 → 363
    C2B_Synaptotagmin-15; C2 domain second repeat present in Synaptotagmin 15
    cl14603
    Location:154 → 226
    C2; C2 domain
Nucleotide Protein
Heading Accession and Version

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