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BBOF1 basal body orientation factor 1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102376829, updated on 10-Mar-2024

Summary

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Gene symbol
BBOF1
Gene description
basal body orientation factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
CCDC176
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841835.1 (2156753..2172439, complement)

NW_005841835.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112549881 Neighboring gene uncharacterized LOC102387560 Neighboring gene aldehyde dehydrogenase 6 family member A1 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 5 (inactive) Neighboring gene zinc finger protein 410 Neighboring gene FAM161 centrosomal protein B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841835 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
basal body-orientation factor 1
Names
coiled-coil domain containing 176

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841835.1 Reference ASM45574v1 Primary Assembly

    Range
    2156753..2172439 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025201229.1 → XP_025057014.1  basal body-orientation factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0GBM2
    Conserved Domains (2) summary
    pfam14988
    Location:61 → 221
    DUF4515; Domain of unknown function (DUF4515)
    pfam13851
    Location:176 → 301
    GAS; Growth-arrest specific micro-tubule binding

  2. XM_014519215.2 → XP_014374701.1  basal body-orientation factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A1U8D355
    Conserved Domains (2) summary
    pfam13851
    Location:224 → 349
    GAS; Growth-arrest specific micro-tubule binding
    pfam14988
    Location:79 → 269
    DUF4515; Domain of unknown function (DUF4515)

RNA

  1. XR_003093470.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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