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HEATR5B HEAT repeat containing 5B [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102375197, updated on 10-Mar-2024

Summary

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Gene symbol
HEATR5B
Gene description
HEAT repeat containing 5B
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
38
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841901.1 (2796616..2879822, complement)

NW_005841901.1Genomic Context describing neighboring genes Neighboring gene vitrin Neighboring gene striatin Neighboring gene G-patch domain containing 11 Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 2 Neighboring gene sulfotransferase 6B1-like Neighboring gene N-acetylneuraminic acid phosphatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841901 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
HEAT repeat-containing protein 5B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841901.1 Reference ASM45574v1 Primary Assembly

    Range
    2796616..2879822 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014517332.2 → XP_014372818.1  HEAT repeat-containing protein 5B isoform X3

    UniProtKB/TrEMBL
    A0A1U8CUV6
    Conserved Domains (1) summary
    sd00044
    Location:852 → 882
    HEAT; HEAT repeat [structural motif]

  2. XM_025197617.1 → XP_025053402.1  HEAT repeat-containing protein 5B isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G1S2
    Conserved Domains (1) summary
    sd00044
    Location:852 → 882
    HEAT; HEAT repeat [structural motif]

  3. XM_025197618.1 → XP_025053403.1  HEAT repeat-containing protein 5B isoform X1

    UniProtKB/TrEMBL
    A0A3Q0G1S2
    Conserved Domains (1) summary
    sd00044
    Location:852 → 882
    HEAT; HEAT repeat [structural motif]

  4. XM_006018419.3 → XP_006018481.1  HEAT repeat-containing protein 5B isoform X2

    UniProtKB/TrEMBL
    A0A1U7R779
    Conserved Domains (1) summary
    sd00044
    Location:852 → 882
    HEAT; HEAT repeat [structural motif]

  5. XM_025197619.1 → XP_025053404.1  HEAT repeat-containing protein 5B isoform X4

    UniProtKB/TrEMBL
    A0A3Q0G188
    Conserved Domains (1) summary
    sd00044
    Location:852 → 882
    HEAT; HEAT repeat [structural motif]

  6. XM_025197620.1 → XP_025053405.1  HEAT repeat-containing protein 5B isoform X5

    UniProtKB/TrEMBL
    A0A3Q0G4Q9
    Conserved Domains (1) summary
    sd00044
    Location:852 → 882
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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