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AKAP1 A-kinase anchoring protein 1 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102373028, updated on 10-Mar-2024

Summary

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Gene symbol
AKAP1
Gene description
A-kinase anchoring protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005841850.1 (3624741..3653562, complement)

NW_005841850.1Genomic Context describing neighboring genes Neighboring gene musashi RNA binding protein 2 Neighboring gene uncharacterized LOC112551155 Neighboring gene uncharacterized LOC112551151 Neighboring gene uncharacterized LOC102372773 Neighboring gene neurofibromin 1 Neighboring gene ecotropic viral integration site 2A Neighboring gene ecotropic viral integration site 2B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005841850 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A-kinase anchor protein 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005841850.1 Reference ASM45574v1 Primary Assembly

    Range
    3624741..3653562 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025210527.1 → XP_025066312.1  A-kinase anchor protein 1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3Q0H3P2

  2. XM_025210514.1 → XP_025066299.1  A-kinase anchor protein 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A1U8DAE9
    Conserved Domains (2) summary
    cd00105
    Location:607 → 667
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    pfam00567
    Location:715 → 824
    TUDOR; Tudor domain

  3. XM_025210519.1 → XP_025066304.1  A-kinase anchor protein 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A1U8DAE9
    Conserved Domains (2) summary
    cd00105
    Location:607 → 667
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    pfam00567
    Location:715 → 824
    TUDOR; Tudor domain

  4. XM_025210523.1 → XP_025066308.1  A-kinase anchor protein 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A1U8DAE9
    Conserved Domains (2) summary
    cd00105
    Location:607 → 667
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    pfam00567
    Location:715 → 824
    TUDOR; Tudor domain

  5. XM_025210534.1 → XP_025066319.1  A-kinase anchor protein 1, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A3Q0H2R2

RNA

  1. XR_003095350.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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