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HMGB3 high mobility group box 3 [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102370233, updated on 10-Mar-2024

Summary

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Gene symbol
HMGB3
Gene description
high mobility group box 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842112.1 (232272..235515, complement)

NW_005842112.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112550446 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene G protein-coupled receptor 50 Neighboring gene CD99 molecule like 2 Neighboring gene myotubularin related protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842112 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding, bending IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high mobility group protein B3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842112.1 Reference ASM45574v1 Primary Assembly

    Range
    232272..235515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006024637.3 → XP_006024699.1  high mobility group protein B3

    See identical proteins and their annotated locations for XP_006024699.1

    UniProtKB/TrEMBL
    A0A1U7RRN1
    Conserved Domains (2) summary
    pfam00505
    Location:93 → 160
    HMG_box; HMG (high mobility group) box
    pfam09011
    Location:13 → 78
    HMG_box_2; HMG-box domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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