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SEC24B SEC24 homolog B, COPII coat complex component [ Alligator sinensis (Chinese alligator) ]

Gene ID: 102370176, updated on 10-Mar-2024

Summary

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Gene symbol
SEC24B
Gene description
SEC24 homolog B, COPII coat complex component
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See SEC24B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842489.1 (1006258..1104172)

NW_005842489.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene transfer RNA tryptophan (anticodon CCA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842489 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle cargo loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein Sec24B
Names
SEC24 family member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842489.1 Reference ASM45574v1 Primary Assembly

    Range
    1006258..1104172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006031254.2 → XP_006031316.1  protein transport protein Sec24B

    UniProtKB/TrEMBL
    A0A1U7S509
    Conserved Domains (6) summary
    COG5028
    Location:378 → 1184
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    cd01479
    Location:600 → 843
    Sec24-like; Sec24-like: Protein and membrane traffic in eukaryotes is mediated by at least in part by the budding and fusion of intracellular transport vesicles that selectively carry cargo proteins and lipids from donor to acceptor organelles. The two main classes ...
    pfam00626
    Location:1064 → 1139
    Gelsolin; Gelsolin repeat
    pfam04810
    Location:527 → 563
    zf-Sec23_Sec24; Sec23/Sec24 zinc finger
    pfam04815
    Location:943 → 1035
    Sec23_helical; Sec23/Sec24 helical domain
    pfam08033
    Location:844 → 928
    Sec23_BS; Sec23/Sec24 beta-sandwich domain
Nucleotide Protein
Heading Accession and Version

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