U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SF3B5 splicing factor 3b, subunit 5 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102366685, updated on 26-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
SF3B5
Gene description
splicing factor 3b, subunit 5
See related
Ensembl:ENSLACG00000000946
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 3 NC_088141.1 (141670267..141671974, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005825374.1 (6982..8689)

Chromosome 3 - NC_088141.1Genomic Context describing neighboring genes Neighboring gene opioid receptor, mu 1 Neighboring gene zinc finger protein PLAGL1-like Neighboring gene LINE-1 reverse transcriptase homolog Neighboring gene uncharacterized LOC135355687 Neighboring gene LTV1 ribosome biogenesis factor

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
splicing factor 3B subunit 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088141.1 Reference fLatCha1.pri

    Range
    141670267..141671974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006014093.2 → XP_006014155.1  splicing factor 3B subunit 5

    UniProtKB/TrEMBL
    H2ZUI6
    Related
    ENSLACP00000001057.1, ENSLACT00000001067.1
    Conserved Domains (1) summary
    pfam07189
    Location:3 → 77
    SF3b10; Splicing factor 3B subunit 10 (SF3b10)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.