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ITGA1 integrin, alpha 1 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102365285, updated on 6-Jun-2024

Summary

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Gene symbol
ITGA1
Gene description
integrin, alpha 1
See related
Ensembl:ENSLACG00000001834
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 1 NC_088139.1 (44194999..44379015)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005821214.1 (31767..158347, complement)

Chromosome 1 - NC_088139.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene ISL LIM homeobox 1a Neighboring gene integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 Neighboring gene molybdopterin synthase catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-1
Names
integrin subunit alpha 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088139.1 Reference fLatCha1.pri

    Range
    44194999..44379015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064568388.1 → XP_064424458.1  integrin alpha-1

    UniProtKB/TrEMBL
    H2ZXD1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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