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CCT4 chaperonin containing TCP1, subunit 4 (delta) [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102360002, updated on 26-Apr-2024

Summary

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Gene symbol
CCT4
Gene description
chaperonin containing TCP1, subunit 4 (delta)
See related
Ensembl:ENSLACG00000018104
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 3 NC_088141.1 (54959970..54982195, complement)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819056.1 (2733099..2755234)

Chromosome 3 - NC_088141.1Genomic Context describing neighboring genes Neighboring gene exportin-1 Neighboring gene FAM161 centrosomal protein A Neighboring gene copper metabolism (Murr1) domain containing 1 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chaperonin-containing T-complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-complex protein 1 subunit delta
Names
chaperonin containing TCP1 subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088141.1 Reference fLatCha1.pri

    Range
    54959970..54982195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005989563.3 → XP_005989625.1  T-complex protein 1 subunit delta

    UniProtKB/TrEMBL
    H3BFD1
    Related
    ENSLACP00000020602.1
    Conserved Domains (2) summary
    cd03338
    Location:21 → 534
    TCP1_delta; TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins ...
    pfam00118
    Location:40 → 535
    Cpn60_TCP1; TCP-1/cpn60 chaperonin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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