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TCEANC2 transcription elongation factor A (SII) N-terminal and central domain containing 2 [ Latimeria chalumnae (coelacanth) ]

Gene ID: 102355588, updated on 26-Apr-2024

Summary

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Gene symbol
TCEANC2
Gene description
transcription elongation factor A (SII) N-terminal and central domain containing 2
See related
Ensembl:ENSLACG00000007571
Gene type
protein coding
RefSeq status
MODEL
Organism
Latimeria chalumnae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 6 NC_088144.1 (20093244..20102020)
101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819827.1 (285630..293530, complement)

Chromosome 6 - NC_088144.1Genomic Context describing neighboring genes Neighboring gene low-density lipoprotein receptor class A domain-containing protein 1 Neighboring gene transmembrane protein 59 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor A N-terminal and central domain-containing protein 2
Names
transcription elongation factor A N-terminal and central domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLatCha1.pri

Genomic

  1. NC_088144.1 Reference fLatCha1.pri

    Range
    20093244..20102020
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006002546.3 → XP_006002608.1  transcription elongation factor A N-terminal and central domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    H3AFY7
    Related
    ENSLACP00000008558.2
    Conserved Domains (2) summary
    cd00183
    Location:39 → 112
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme
    cl02637
    Location:129 → 203
    TFIIS_M; Transcription factor S-II (TFIIS), central domain

  2. XM_006002547.3 → XP_006002609.1  transcription elongation factor A N-terminal and central domain-containing protein 2 isoform X2

    Conserved Domains (1) summary
    cd00183
    Location:39 → 112
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme
Nucleotide Protein
Heading Accession and Version

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