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ITGA10 integrin subunit alpha 10 [ Bos mutus (wild yak) ]

Gene ID: 102287332, updated on 10-Mar-2024

Summary

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Gene symbol
ITGA10
Gene description
integrin subunit alpha 10
Locus tag
M91_04793
See related
Ensembl:ENSBMUG00000006839
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005393999.1 (718624..735933, complement)

NW_005393999.1Genomic Context describing neighboring genes Neighboring gene nudix hydrolase 17 Neighboring gene protein inhibitor of activated STAT 3 Neighboring gene ankyrin repeat domain 35 Neighboring gene peroxisomal biogenesis factor 11 beta Neighboring gene gonadotropin-releasing hormone II receptor-like Neighboring gene RNA binding motif protein 8A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005393999.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin alpha-10
Names
Integrin alpha-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005393999.1 Reference BosGru_v2.0 Primary Assembly

    Range
    718624..735933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005898518.2 → XP_005898580.1  integrin alpha-10 isoform X4

    Conserved Domains (3) summary
    smart00191
    Location:402 → 456
    Int_alpha; Integrin alpha (beta-propellor repeats)
    cd01469
    Location:23 → 203
    vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
    pfam08441
    Location:499 → 906
    Integrin_alpha2; Integrin alpha

  2. XM_005898516.2 → XP_005898578.1  integrin alpha-10 isoform X2

    UniProtKB/TrEMBL
    A0A6B0S8Z3
    Conserved Domains (3) summary
    smart00191
    Location:545 → 599
    Int_alpha; Integrin alpha (beta-propellor repeats)
    cd01469
    Location:166 → 346
    vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
    pfam08441
    Location:642 → 1049
    Integrin_alpha2; Integrin alpha

  3. XM_005898515.1 → XP_005898577.1  integrin alpha-10 isoform X1

    See identical proteins and their annotated locations for XP_005898577.1

    UniProtKB/TrEMBL
    A0A6B0S8Z3, L8ID44
    Related
    ENSBMUP00000008818.1, ENSBMUT00000010278.1
    Conserved Domains (3) summary
    smart00191
    Location:545 → 599
    Int_alpha; Integrin alpha (beta-propellor repeats)
    cd01469
    Location:166 → 346
    vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
    pfam08441
    Location:642 → 1050
    Integrin_alpha2; Integrin alpha

  4. XM_005898517.2 → XP_005898579.1  integrin alpha-10 isoform X3

    Related
    ENSBMUP00000008823.1, ENSBMUT00000010282.1
    Conserved Domains (3) summary
    smart00191
    Location:402 → 456
    Int_alpha; Integrin alpha (beta-propellor repeats)
    cd01469
    Location:23 → 203
    vWA_integrins_alpha_subunit; Integrins are a class of adhesion receptors that link the extracellular matrix to the cytoskeleton and cooperate with growth factor receptors to promote celll survival, cell cycle progression and cell migration. Integrins consist of an alpha and a beta ...
    pfam08441
    Location:499 → 907
    Integrin_alpha2; Integrin alpha
Nucleotide Protein
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