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DDX52 DExD-box helicase 52 [ Bos mutus (wild yak) ]

Gene ID: 102285768, updated on 10-Mar-2024

Summary

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Gene symbol
DDX52
Gene description
DExD-box helicase 52
Locus tag
M91_17476
See related
Ensembl:ENSBMUG00000005809
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos mutus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current BosGru_v2.0 (GCF_000298355.1) Unplaced Scaffold NW_005392972.1 (581451..604033, complement)

NW_005392972.1Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 14 Neighboring gene synergin gamma Neighboring gene HNF1 homeobox B Neighboring gene HEAT repeat containing 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005392972.1 Unplaced Scaffold Reference BosGru_v2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The yak genome and adaptation to life at high altitude. Qiu Q, et al. Nat Genet, 2012 Jul 1. PMID 22751099

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX52
Names
DEAD-box helicase 52
Putative ATP-dependent RNA helicase DDX52

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos mutus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BosGru_v2.0 Primary Assembly

Genomic

  1. NW_005392972.1 Reference BosGru_v2.0 Primary Assembly

    Range
    581451..604033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005888169.2 → XP_005888231.1  probable ATP-dependent RNA helicase DDX52

    See identical proteins and their annotated locations for XP_005888231.1

    UniProtKB/TrEMBL
    A0A6B0R9G1, L8IZP6
    Related
    ENSBMUP00000007394.1, ENSBMUT00000008645.1
    Conserved Domains (3) summary
    PRK11192
    Location:160 → 591
    PRK11192; ATP-dependent RNA helicase SrmB; Provisional
    pfam00271
    Location:396 → 505
    Helicase_C; Helicase conserved C-terminal domain
    cl21455
    Location:167 → 364
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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