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SMO smoothened, frizzled class receptor [ Myotis brandtii (Brandt's bat) ]

Gene ID: 102258432, updated on 30-Mar-2024

Summary

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Gene symbol
SMO
Gene description
smoothened, frizzled class receptor
Locus tag
D623_10012836
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis brandtii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See SMO in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM41265v1 (GCF_000412655.1) Unplaced Scaffold NW_005360677.1 (624301..646976)

NW_005360677.1Genomic Context describing neighboring genes Neighboring gene V-type proton ATPase subunit E 1 pseudogene Neighboring gene tetraspanin 33 Neighboring gene protein kish-A pseudogene Neighboring gene uncharacterized LOC102249526

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005360677.1 Unplaced Scaffold Reference ASM41265v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables patched binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in commissural neuron axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
smoothened homolog
Names
Smoothened like protein
smoothened, frizzled family receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis brandtii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM41265v1

Genomic

  1. NW_005360677.1 Reference ASM41265v1

    Range
    624301..646976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005868967.2 → XP_005869029.1  smoothened homolog

    UniProtKB/TrEMBL
    S7PG13
    Conserved Domains (2) summary
    cd07451
    Location:19 → 143
    CRD_SMO; Cysteine-rich domain of the smoothened receptor (Smo) integral membrane protein
    pfam01534
    Location:168 → 497
    Frizzled; Frizzled/Smoothened family membrane region
Nucleotide Protein
Heading Accession and Version

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