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scai suppressor of cancer cell invasion [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102229806, updated on 10-Mar-2024

Summary

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Gene symbol
scai
Gene description
suppressor of cancer cell invasion
See related
Ensembl:ENSXMAG00000021091
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 8
Exon count:
18
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 8 NC_036450.1 (1104138..1127409)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372751.1 (178799..186665)

Chromosome 8 - NC_036450.1Genomic Context describing neighboring genes Neighboring gene stromelysin-3-like Neighboring gene serine/threonine-protein phosphatase 6 catalytic subunit-like Neighboring gene outer dense fiber of sperm tails 2a Neighboring gene spectrin alpha, non-erythrocytic 1 Neighboring gene dynein 2 intermediate chain 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SCAI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036450.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    1104138..1127409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023337696.1 → XP_023193464.1  protein SCAI isoform X4

    UniProtKB/TrEMBL
    A0A3B5QM58
    Related
    ENSXMAP00000032088.1, ENSXMAT00000021978.1
    Conserved Domains (1) summary
    pfam12070
    Location:23 → 517
    SCAI; Protein SCAI

  2. XM_023337697.1 → XP_023193465.1  protein SCAI isoform X5

    Conserved Domains (1) summary
    pfam12070
    Location:23 → 516
    SCAI; Protein SCAI

  3. XM_023337693.1 → XP_023193461.1  protein SCAI isoform X1

    Conserved Domains (1) summary
    pfam12070
    Location:68 → 549
    SCAI; Protein SCAI

  4. XM_023337694.1 → XP_023193462.1  protein SCAI isoform X2

    Conserved Domains (1) summary
    pfam12070
    Location:68 → 548
    SCAI; Protein SCAI

  5. XM_023337695.1 → XP_023193463.1  protein SCAI isoform X3

    Conserved Domains (1) summary
    pfam12070
    Location:61 → 542
    SCAI; Protein SCAI
Nucleotide Protein Strain
Heading Accession and Version

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