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tmed6 transmembrane p24 trafficking protein 6 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102222126, updated on 10-Mar-2024

Summary

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Gene symbol
tmed6
Gene description
transmembrane p24 trafficking protein 6
See related
Ensembl:ENSXMAG00000009569
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 2 NC_036444.1 (30744521..30749827, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372411.1 (61635..65896, complement)

Chromosome 2 - NC_036444.1Genomic Context describing neighboring genes Neighboring gene FA core complex associated protein 24 Neighboring gene ankyrin repeat domain 27 (VPS9 domain) Neighboring gene vegetative cell wall protein gp1-like Neighboring gene mixed lineage kinase domain-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036444.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    30744521..30749827 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014472366.2 → XP_014327852.1  transmembrane emp24 domain-containing protein 6

    UniProtKB/TrEMBL
    M4A547
    Related
    ENSXMAP00000009591.2, ENSXMAT00000009605.2
    Conserved Domains (1) summary
    pfam01105
    Location:43 → 230
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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