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sln sarcolipin [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102220387, updated on 10-Mar-2024

Summary

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Gene symbol
sln
Gene description
sarcolipin
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See sln in Genome Data Viewer
Location:
chromosome: 18
Exon count:
1
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 18 NC_036460.1 (18973594..18974130)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005373256.1 (31399..33620)

Chromosome 18 - NC_036460.1Genomic Context describing neighboring genes Neighboring gene CWF19 like cell cycle control factor 2 Neighboring gene uncharacterized LOC111605775 Neighboring gene alkB homolog 8, tRNA methyltransferase Neighboring gene kelch repeat and BTB (POZ) domain containing 3 Neighboring gene family with sequence similarity 168 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sarcolipin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036460.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    18973594..18974130
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023350976.1 → XP_023206744.1  sarcolipin

    Conserved Domains (1) summary
    cd20253
    Location:2 → 31
    Sarcolipin; Sarcolipin bioactive peptide and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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