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ric1 RIC1 homolog, RAB6A GEF complex partner 1 [ Xiphophorus maculatus (southern platyfish) ]

Gene ID: 102216761, updated on 10-Mar-2024

Summary

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Gene symbol
ric1
Gene description
RIC1 homolog, RAB6A GEF complex partner 1
See related
Ensembl:ENSXMAG00000005243
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus maculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See ric1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
27
Annotation release Status Assembly Chr Location
102 current X_maculatus-5.0-male (GCF_002775205.1) 8 NC_036450.1 (14632439..14660915, complement)
101 previous assembly Xiphophorus_maculatus-4.4.2 (GCF_000241075.1) Unplaced Scaffold NW_005372280.1 (311914..341943, complement)

Chromosome 8 - NC_036450.1Genomic Context describing neighboring genes Neighboring gene ornithine decarboxylase antizyme 1b Neighboring gene endoplasmic reticulum metallopeptidase 1 Neighboring gene exosome component 2 Neighboring gene c-abl oncogene 1, non-receptor tyrosine kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Ric1-Rgp1 guanyl-nucleotide exchange factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RAB6A-GEF complex partner protein 1
Names
protein RIC1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus maculatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_maculatus-5.0-male Primary Assembly

Genomic

  1. NC_036450.1 Reference X_maculatus-5.0-male Primary Assembly

    Range
    14632439..14660915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023338874.1 → XP_023194642.1  RAB6A-GEF complex partner protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B5Q3P9
    Conserved Domains (1) summary
    pfam07064
    Location:739 → 993
    RIC1

  2. XM_014470500.2 → XP_014325986.1  RAB6A-GEF complex partner protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B5Q3P9, M3ZSS5
    Related
    ENSXMAP00000005268.1, ENSXMAT00000005274.2
    Conserved Domains (1) summary
    pfam07064
    Location:740 → 994
    RIC1; RIC1
Nucleotide Protein Strain
Heading Accession and Version

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