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tbrg4 transforming growth factor beta regulator 4 [ Pundamilia nyererei ]

Gene ID: 102214896, updated on 10-Mar-2024

Summary

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Gene symbol
tbrg4
Gene description
transforming growth factor beta regulator 4
See related
Ensembl:ENSPNYG00000017453
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187485.1 (1875302..1881843, complement)

NW_005187485.1Genomic Context describing neighboring genes Neighboring gene GLI pathogenesis-related 2, like Neighboring gene NAC alpha domain containing Neighboring gene ATPase H+/K+ transporting subunit alpha Neighboring gene DENN domain-containing protein 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187485.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitochondrial mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein TBRG4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187485.1 Reference PunNye1.0

    Range
    1875302..1881843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005738543.1 → XP_005738600.1  protein TBRG4

    UniProtKB/TrEMBL
    A0A3B4GNP6
    Related
    ENSPNYP00000023108.1, ENSPNYT00000023675.1
    Conserved Domains (3) summary
    smart00952
    Location:569 → 623
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:374 → 442
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:458 → 538
    FAST_2; FAST kinase-like protein, subdomain 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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