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clec11a C-type lectin domain containing 11A [ Pundamilia nyererei ]

Gene ID: 102202984, updated on 10-Mar-2024

Summary

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Gene symbol
clec11a
Gene description
C-type lectin domain containing 11A
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187475.1 (608845..613039)

NW_005187475.1Genomic Context describing neighboring genes Neighboring gene gap junction Cx32.2 protein-like Neighboring gene chromosome unknown C1orf198 homolog Neighboring gene selenoprotein L Neighboring gene tetratricopeptide repeat domain 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187475.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
C-type lectin domain family 11 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187475.1 Reference PunNye1.0

    Range
    608845..613039
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005737214.1 → XP_005737271.1  C-type lectin domain family 11 member A isoform X1

    See identical proteins and their annotated locations for XP_005737271.1

    UniProtKB/TrEMBL
    A0A9Y3RLH6
    Conserved Domains (1) summary
    cd03596
    Location:145 → 274
    CLECT_tetranectin_like; C-type lectin-like domain (CTLD) of the type found in the tetranectin (TN), cartilage derived C-type lectin (CLECSF1), and stem cell growth factor (SCGF)

  2. XM_005737215.1 → XP_005737272.1  C-type lectin domain family 11 member A isoform X2

    See identical proteins and their annotated locations for XP_005737272.1

    UniProtKB/TrEMBL
    A0A9Y3R8P4
    Conserved Domains (1) summary
    cd03596
    Location:139 → 268
    CLECT_tetranectin_like; C-type lectin-like domain (CTLD) of the type found in the tetranectin (TN), cartilage derived C-type lectin (CLECSF1), and stem cell growth factor (SCGF)
Nucleotide Protein
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