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plce1 phospholipase C, epsilon 1 [ Pundamilia nyererei ]

Gene ID: 102201005, updated on 10-Mar-2024

Summary

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Gene symbol
plce1
Gene description
phospholipase C, epsilon 1
See related
Ensembl:ENSPNYG00000000760
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
45
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187597.1 (313903..379760, complement)

NW_005187597.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat-containing protein 51-like Neighboring gene protocadherin-15-like Neighboring gene uncharacterized LOC102201865 Neighboring gene solute carrier family 35 member G1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187597.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187597.1 Reference PunNye1.0

    Range
    313903..379760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005747368.1 → XP_005747425.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X3

    UniProtKB/TrEMBL
    A0A3B4EV86, A0A9Y3RXG5
    Related
    ENSPNYP00000001056.1, ENSPNYT00000001076.1
    Conserved Domains (7) summary
    cd00275
    Location:1857 → 1969
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2129 → 2228
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1360 → 1818
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02222
    Location:1292 → 1968
    PLN02222; phosphoinositide phospholipase C 2
    pfam00617
    Location:514 → 718
    RasGEF; RasGEF domain
    pfam09279
    Location:1296 → 1347
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl17171
    Location:867 → 981
    PH-like; Pleckstrin homology-like domain

  2. XM_005747369.1 → XP_005747426.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X2

    UniProtKB/TrEMBL
    A0A3B4EV86, A0A9Y3VSN2
    Conserved Domains (7) summary
    cd00275
    Location:1857 → 1969
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2129 → 2228
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1374 → 1818
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02222
    Location:1306 → 1968
    PLN02222; phosphoinositide phospholipase C 2
    pfam00617
    Location:514 → 718
    RasGEF; RasGEF domain
    pfam09279
    Location:1310 → 1361
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl17171
    Location:881 → 995
    PH-like; Pleckstrin homology-like domain

  3. XM_013914413.1 → XP_013769867.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4EV86, A0A9Y6JHJ3
    Conserved Domains (7) summary
    cd00275
    Location:1871 → 1983
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2143 → 2242
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1374 → 1832
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02222
    Location:1306 → 1982
    PLN02222; phosphoinositide phospholipase C 2
    pfam00617
    Location:514 → 718
    RasGEF; RasGEF domain
    pfam09279
    Location:1310 → 1361
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl17171
    Location:881 → 995
    PH-like; Pleckstrin homology-like domain

  4. XM_005747371.1 → XP_005747428.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X5

    UniProtKB/TrEMBL
    A0A3B4EV86, A0A9Y3VQE9
    Conserved Domains (7) summary
    cd00275
    Location:1400 → 1512
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:1672 → 1771
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:903 → 1361
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02222
    Location:835 → 1511
    PLN02222; phosphoinositide phospholipase C 2
    pfam00617
    Location:43 → 247
    RasGEF; RasGEF domain
    pfam09279
    Location:839 → 890
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl17171
    Location:410 → 524
    PH-like; Pleckstrin homology-like domain

  5. XM_013914416.1 → XP_013769870.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X6

    UniProtKB/TrEMBL
    A0A3B4EV86, A0A9Y6JL50
    Conserved Domains (7) summary
    cd00275
    Location:1843 → 1955
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2115 → 2214
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1360 → 1804
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02222
    Location:1292 → 1954
    PLN02222; phosphoinositide phospholipase C 2
    pfam00617
    Location:514 → 718
    RasGEF; RasGEF domain
    pfam09279
    Location:1296 → 1347
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl17171
    Location:867 → 981
    PH-like; Pleckstrin homology-like domain

  6. XM_005747370.1 → XP_005747427.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X4

    UniProtKB/TrEMBL
    A0A3B4EV86, A0A9Y6JH87
    Conserved Domains (7) summary
    cd00275
    Location:1871 → 1983
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2143 → 2242
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1374 → 1832
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02222
    Location:1306 → 1982
    PLN02222; phosphoinositide phospholipase C 2
    pfam00617
    Location:514 → 718
    RasGEF; RasGEF domain
    pfam09279
    Location:1310 → 1361
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl17171
    Location:881 → 995
    PH-like; Pleckstrin homology-like domain

  7. XM_013914414.1 → XP_013769868.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X4

    UniProtKB/TrEMBL
    A0A3B4EV86, A0A9Y6JH87
    Conserved Domains (7) summary
    cd00275
    Location:1871 → 1983
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2143 → 2242
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1374 → 1832
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02222
    Location:1306 → 1982
    PLN02222; phosphoinositide phospholipase C 2
    pfam00617
    Location:514 → 718
    RasGEF; RasGEF domain
    pfam09279
    Location:1310 → 1361
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl17171
    Location:881 → 995
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
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