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znf622 zinc finger protein 622 [ Pundamilia nyererei ]

Gene ID: 102192162, updated on 10-Mar-2024

Summary

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Gene symbol
znf622
Gene description
zinc finger protein 622
See related
Ensembl:ENSPNYG00000016004
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187578.1 (6166..32279)

NW_005187578.1Genomic Context describing neighboring genes Neighboring gene membrane-associated ring finger (C3HC4) 11 Neighboring gene myosin X

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187578.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 622

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187578.1 Reference PunNye1.0

    Range
    6166..32279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005746323.1 → XP_005746380.1  zinc finger protein 622

    See identical proteins and their annotated locations for XP_005746380.1

    UniProtKB/TrEMBL
    A0A3B4GE26
    Related
    ENSPNYP00000021175.1, ENSPNYT00000021686.1
    Conserved Domains (3) summary
    sd00020
    Location:6 → 28
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12756
    Location:248 → 347
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)
    pfam12874
    Location:70 → 93
    zf-met; Zinc-finger of C2H2 type

  2. XM_005746322.1 → XP_005746379.1  zinc finger protein 622

    See identical proteins and their annotated locations for XP_005746379.1

    UniProtKB/TrEMBL
    A0A3B4GE26
    Conserved Domains (3) summary
    sd00020
    Location:6 → 28
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12756
    Location:248 → 347
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)
    pfam12874
    Location:70 → 93
    zf-met; Zinc-finger of C2H2 type
Nucleotide Protein
Heading Accession and Version

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