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IRX1 iroquois homeobox 1 [ Capra hircus (goat) ]

Gene ID: 102181239, updated on 1-Aug-2024

Summary

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Gene symbol
IRX1
Gene description
iroquois homeobox 1
See related
EnsemblRapid:ENSCHIG00000017851
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 20 NC_030827.1 (69288154..69307369, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 20 NC_022312.1 (68726312..68726729, complement)

Chromosome 20 - NC_030827.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 16 Neighboring gene uncharacterized LOC106503333 Neighboring gene uncharacterized LOC106503325 Neighboring gene IRX2 divergent transcript Neighboring gene iroquois homeobox 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
iroquois-class homeodomain protein IRX-1
Names
iroquois-class homeodomain protein IRX-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030827.1 Reference ASM170441v1 Primary Assembly

    Range
    69288154..69307369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018065740.1 → XP_017921229.1  iroquois-class homeodomain protein IRX-1 isoform X1

    UniProtKB/TrEMBL
    A0AAJ7P7Z8
    Related
    ENSCHIP00000034548.1, ENSCHIT00000052651.1

  2. XM_018065741.1 → XP_017921230.1  iroquois-class homeodomain protein IRX-1 isoform X2

    UniProtKB/TrEMBL
    A0A452F2J9
    Related
    ENSCHIP00000018410.2, ENSCHIT00000026225.2
Nucleotide Protein
Heading Accession and Version

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