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PLOD1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [ Pseudopodoces humilis (Tibetan ground-tit) ]

Gene ID: 102110217, updated on 3-Aug-2024

Summary

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Gene symbol
PLOD1
Gene description
procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudopodoces humilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Pseudopodoces
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current PseHum1.0 (GCF_000331425.1) Unplaced Scaffold NW_005087600.1 (2250698..2266858)

NW_005087600.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102110218 Neighboring gene KIAA2013 ortholog Neighboring gene mitofusin 2 Neighboring gene migration and invasion inhibitory protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005087600.1 Unplaced Scaffold Reference PseHum1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-lysine 5-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen-lysine,2-oxoglutarate 5-dioxygenase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudopodoces humilis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PseHum1.0 Primary Assembly

Genomic

  1. NW_005087600.1 Reference PseHum1.0 Primary Assembly

    Range
    2250698..2266858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005528306.2 → XP_005528363.1  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1

    Conserved Domains (1) summary
    smart00702
    Location:565 → 727
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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