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SLC1A2 solute carrier family 1 member 2 [ Columba livia (rock pigeon) ]

Gene ID: 102098581, updated on 3-Aug-2024

Summary

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Gene symbol
SLC1A2
Gene description
solute carrier family 1 member 2
Locus tag
A306_11420
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Also known as
GLT1
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 5 NC_088606.1 (48364041..48392677)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973227.1 (388761..417240, complement)

Chromosome 5 - NC_088606.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135579601 Neighboring gene peptidase domain containing associated with muscle regeneration 1 Neighboring gene uncharacterized LOC110357277 Neighboring gene CD44 molecule (IN blood group) Neighboring gene uncharacterized LOC135579602 Neighboring gene pyruvate dehydrogenase complex component X

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Distribution of glutamate transporter 1 mRNA in the central nervous system of the pigeon (Columba livia). Atoji Y, et al. J Chem Neuroanat, 2009 Jul. PMID 19481008

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-glutamate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neutral L-amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-aspartate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in L-glutamate import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
excitatory amino acid transporter 2
Names
glutamate transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001282830.1 → NP_001269759.1  excitatory amino acid transporter 2

    See identical proteins and their annotated locations for NP_001269759.1

    Status: PROVISIONAL

    Source sequence(s)
    FJ825434
    UniProtKB/TrEMBL
    A0A2I0MPG0, C1KGB5
    Conserved Domains (1) summary
    pfam00375
    Location:37 → 487
    SDF; Sodium:dicarboxylate symporter family

RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088606.1 Reference bColLiv1.pat.W.v2

    Range
    48364041..48392677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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