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KLF6 KLF transcription factor 6 [ Columba livia (rock pigeon) ]

Gene ID: 102098345, updated on 3-Aug-2024

Summary

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Gene symbol
KLF6
Gene description
KLF transcription factor 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 2 NC_088603.1 (13661960..13670970, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973312.1 (401674..410580, complement)

Chromosome 2 - NC_088603.1Genomic Context describing neighboring genes Neighboring gene phosphofructokinase, platelet Neighboring gene pitrilysin metallopeptidase 1 Neighboring gene uncharacterized LOC135578404 Neighboring gene uncharacterized LOC135578405

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic diversity and evolution of the head crest in the rock pigeon. Shapiro MD, et al. Science, 2013 Mar 1. PMID 23371554, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 6
Names
Kruppel like factor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088603.1 Reference bColLiv1.pat.W.v2

    Range
    13661960..13670970 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005504158.4 → XP_005504215.1  Krueppel-like factor 6

    See identical proteins and their annotated locations for XP_005504215.1

    UniProtKB/TrEMBL
    A0A2I0MQ45
    Conserved Domains (3) summary
    COG5048
    Location:191 → 265
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:205 → 224
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:260 → 282
    zf-C2H2; Zinc finger, C2H2 type
Nucleotide Protein
Heading Accession and Version

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