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RXYLT1 ribitol xylosyltransferase 1 [ Columba livia (rock pigeon) ]

Gene ID: 102086203, updated on 3-Aug-2024

Summary

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Gene symbol
RXYLT1
Gene description
ribitol xylosyltransferase 1
Locus tag
A306_10744
Gene type
protein coding
RefSeq status
MODEL
Organism
Columba livia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba
Also known as
TMEM5
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_05 current bColLiv1.pat.W.v2 (GCF_036013475.1) 1 NC_088602.1 (176404138..176415756, complement)
102 previous assembly Cliv_1.0 (GCF_000337935.1) Unplaced Scaffold NW_004973207.1 (1031057..1041985, complement)

Chromosome 1 - NC_088602.1Genomic Context describing neighboring genes Neighboring gene KICSTOR subunit 2 Neighboring gene SLIT-ROBO Rho GTPase activating protein 1 Neighboring gene arginine vasopressin receptor 1A Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1H

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribitol beta-1,4-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribitol-5-phosphate xylosyltransferase 1
Names
transmembrane protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036013475.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColLiv1.pat.W.v2

Genomic

  1. NC_088602.1 Reference bColLiv1.pat.W.v2

    Range
    176404138..176415756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065048583.1 → XP_064904655.1  ribitol-5-phosphate xylosyltransferase 1

    UniProtKB/TrEMBL
    A0A2I0MJ64
Nucleotide Protein
Heading Accession and Version

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