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CRTAP cartilage associated protein [ Falco cherrug (Saker falcon) ]

Gene ID: 102053714, updated on 3-Aug-2024

Summary

Gene symbol
CRTAP
Gene description
cartilage associated protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco cherrug
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
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Genomic context

See CRTAP in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalChe1.pri (GCF_023634085.1) 4 NC_073700.1 (96887294..96909935, complement)
102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994835.1 (657174..675655, complement)

Chromosome 4 - NC_073700.1Genomic Context describing neighboring genes Neighboring gene F-box and leucine rich repeat protein 2 Neighboring gene sushi domain containing 5 Neighboring gene leucine zipper transcription factor like 1 Neighboring gene solute carrier family 6 member 20

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables collagen binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in collagen fibril organization IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in peptidyl-proline hydroxylation to 3-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
cartilage-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalChe1.pri Primary Assembly

Genomic

  1. NC_073700.1 Reference bFalChe1.pri Primary Assembly

    Range
    96887294..96909935 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055709059.1XP_055565034.1  cartilage-associated protein

RNA

  1. XR_008732026.1 RNA Sequence