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CPNE3 copine 3 [ Falco cherrug (Saker falcon) ]

Gene ID: 102050305, updated on 3-Aug-2024

Summary

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Gene symbol
CPNE3
Gene description
copine 3
See related
EnsemblRapid:ENSFCHG00000005168
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco cherrug
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalChe1.pri (GCF_023634085.1) 3 NC_073699.1 (35026884..35061182, complement)
102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994908.1 (6059486..6093764, complement)

Chromosome 3 - NC_073699.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114017592 Neighboring gene cyclic nucleotide gated channel subunit beta 3 Neighboring gene regulator of microtubule dynamics 1 Neighboring gene WW domain containing E3 ubiquitin protein ligase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ERBB2 signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
copine-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalChe1.pri Primary Assembly

Genomic

  1. NC_073699.1 Reference bFalChe1.pri Primary Assembly

    Range
    35026884..35061182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055703576.1 → XP_055559551.1  copine-3

  2. XM_055703577.1 → XP_055559552.1  copine-3

  3. XM_055703578.1 → XP_055559553.1  copine-3

  4. XM_055703579.1 → XP_055559554.1  copine-3

  5. XM_005445408.4 → XP_005445465.1  copine-3

    See identical proteins and their annotated locations for XP_005445465.1

    Conserved Domains (3) summary
    cd04047
    Location:139 → 251
    C2B_Copine; C2 domain second repeat in Copine
    cd04048
    Location:7 → 125
    C2A_Copine; C2 domain first repeat in Copine
    cd01459
    Location:263 → 514
    vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...
Nucleotide Protein
Heading Accession and Version

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