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PPP1R13B protein phosphatase 1 regulatory subunit 13B [ Falco cherrug (Saker falcon) ]

Gene ID: 102045743, updated on 3-Aug-2024

Summary

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Gene symbol
PPP1R13B
Gene description
protein phosphatase 1 regulatory subunit 13B
See related
EnsemblRapid:ENSFCHG00000002330
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco cherrug
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalChe1.pri (GCF_023634085.1) 7 NC_073703.1 (35707786..35776747)
102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994666.1 (1482471..1537532, complement)

Chromosome 7 - NC_073703.1Genomic Context describing neighboring genes Neighboring gene RD3 like Neighboring gene ATP synthase membrane subunit j Neighboring gene zinc finger FYVE-type containing 21 Neighboring gene kinesin light chain 1 Neighboring gene X-ray repair cross complementing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables p53 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apoptosis-stimulating of p53 protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalChe1.pri Primary Assembly

Genomic

  1. NC_073703.1 Reference bFalChe1.pri Primary Assembly

    Range
    35707786..35776747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055716463.1 → XP_055572438.1  apoptosis-stimulating of p53 protein 1 isoform X3

  2. XM_027803512.2 → XP_027659313.2  apoptosis-stimulating of p53 protein 1 isoform X1

  3. XM_027803513.2 → XP_027659314.2  apoptosis-stimulating of p53 protein 1 isoform X2

  4. XM_014278954.3 → XP_014134429.3  apoptosis-stimulating of p53 protein 1 isoform X4

  5. XM_027803514.2 → XP_027659315.2  apoptosis-stimulating of p53 protein 1 isoform X5

  6. XM_027803515.2 → XP_027659316.1  apoptosis-stimulating of p53 protein 1 isoform X6

    Conserved Domains (5) summary
    cd11954
    Location:948 → 1004
    SH3_ASPP1; Src Homology 3 domain of Apoptosis Stimulating of p53 protein 1
    PHA03247
    Location:372 → 728
    PHA03247; large tegument protein UL36; Provisional
    COG1196
    Location:18 → 197
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    sd00045
    Location:818 → 844
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:818 → 904
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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