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UBE2L3 ubiquitin conjugating enzyme E2 L3 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102044017, updated on 3-Aug-2024

Summary

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Gene symbol
UBE2L3
Gene description
ubiquitin conjugating enzyme E2 L3
See related
Ensembl:ENSGFOG00000000284
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054330.1 (3863781..3880886, complement)

NW_005054330.1Genomic Context describing neighboring genes Neighboring gene stromal cell derived factor 2 like 1 Neighboring gene YdjC chitooligosaccharide deacetylase homolog Neighboring gene uncharacterized LOC115947907 Neighboring gene HIC ZBTB transcriptional repressor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054330 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-conjugating enzyme E2 L3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054330.1 Reference GeoFor_1.0

    Range
    3863781..3880886 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031057372.1 → XP_030913232.1  ubiquitin-conjugating enzyme E2 L3 isoform X2

    UniProtKB/TrEMBL
    A0A8N5ELY1
    Related
    ENSGFOP00000000380.1, ENSGFOT00000000393.1
    Conserved Domains (1) summary
    smart00212
    Location:1 → 131
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic domain homologues

  2. XM_031057371.1 → XP_030913231.1  ubiquitin-conjugating enzyme E2 L3 isoform X1

    UniProtKB/TrEMBL
    A0A8N5EQM2
    Conserved Domains (1) summary
    smart00212
    Location:49 → 188
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic domain homologues
Nucleotide Protein
Heading Accession and Version

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