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ZNF384 zinc finger protein 384 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102041389, updated on 3-Aug-2024

Summary

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Gene symbol
ZNF384
Gene description
zinc finger protein 384
See related
Ensembl:ENSGFOG00000013243
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054320.1 (7943620..7964714, complement)

NW_005054320.1Genomic Context describing neighboring genes Neighboring gene acrosin binding protein Neighboring gene inhibitor of growth family member 4 Neighboring gene PILR alpha associated neural protein Neighboring gene COP9 signalosome subunit 7A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054320 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 384

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054320.1 Reference GeoFor_1.0

    Range
    7943620..7964714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005420599.2 → XP_005420656.1  zinc finger protein 384 isoform X1

    UniProtKB/TrEMBL
    A0A6I9HHU6
    Conserved Domains (2) summary
    COG5048
    Location:196 → 407
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_031056617.1 → XP_030912477.1  zinc finger protein 384 isoform X2

    UniProtKB/TrEMBL
    A0A8N5EMI6
    Related
    ENSGFOP00000019691.1, ENSGFOT00000020330.1
    Conserved Domains (3) summary
    COG5048
    Location:178 → 389
    COG5048; FOG: Zn-finger [General function prediction only]
    PRK10856
    Location:58 → 149
    PRK10856; cytoskeleton protein RodZ
    sd00017
    Location:300 → 320
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_031056618.1 → XP_030912478.1  zinc finger protein 384 isoform X3

    UniProtKB/TrEMBL
    A0A8N5EKI2
    Conserved Domains (3) summary
    COG5048
    Location:196 → 407
    COG5048; FOG: Zn-finger [General function prediction only]
    PRK10856
    Location:76 → 167
    PRK10856; cytoskeleton protein RodZ
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_014306856.2 → XP_014162331.1  zinc finger protein 384 isoform X4

    UniProtKB/TrEMBL
    A0A6I9Z6P0
    Related
    ENSGFOP00000019693.1, ENSGFOT00000020332.1
    Conserved Domains (3) summary
    COG5048
    Location:196 → 395
    COG5048; FOG: Zn-finger [General function prediction only]
    PRK10856
    Location:76 → 167
    PRK10856; cytoskeleton protein RodZ
    sd00017
    Location:257 → 277
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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