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IFT46 intraflagellar transport 46 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102036950, updated on 3-Aug-2024

Summary

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Gene symbol
IFT46
Gene description
intraflagellar transport 46
See related
Ensembl:ENSGFOG00000004145
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054447.1 (1513267..1516616, complement)

NW_005054447.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 36 Neighboring gene transmembrane protein 25 Neighboring gene archain 1 Neighboring gene pleckstrin homology like domain family B member 1 Neighboring gene hypoxia up-regulated 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054447 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intraciliary transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport protein 46 homolog
Names
intraflagellar transport 46 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054447.1 Reference GeoFor_1.0

    Range
    1513267..1516616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031062397.1 → XP_030918257.1  intraflagellar transport protein 46 homolog

    UniProtKB/TrEMBL
    A0A8N5EWZ6
    Related
    ENSGFOP00000005821.1, ENSGFOT00000005987.1
    Conserved Domains (1) summary
    pfam12317
    Location:78 → 280
    IFT46_B_C; Intraflagellar transport complex B protein 46 C terminal
Nucleotide Protein
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