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Smad4 SMAD family member 4 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102023215, updated on 10-Mar-2024

Summary

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Gene symbol
Smad4
Gene description
SMAD family member 4
See related
Ensembl:ENSCLAG00000009301
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955402.1 (35956080..36001746)

NW_004955402.1Genomic Context describing neighboring genes Neighboring gene malic enzyme 2 Neighboring gene elaC ribonuclease Z 1 Neighboring gene uncharacterized LOC102022986 Neighboring gene mex-3 RNA binding family member C Neighboring gene uncharacterized LOC106147831

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955402.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables I-SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heteromeric SMAD protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mothers against decapentaplegic homolog 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955402.1 Reference ChiLan1.0 Primary Assembly

    Range
    35956080..36001746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013510745.1 → XP_013366199.1  mothers against decapentaplegic homolog 4 isoform X2

    Conserved Domains (2) summary
    cd10492
    Location:14 → 138
    MH1_SMAD_4; N-terminal Mad Homology 1 (MH1) domain in SMAD4
    cd10498
    Location:280 → 501
    MH2_SMAD_4; C-terminal Mad Homology 2 (MH2) domain in SMAD4

  2. XM_013510741.1 → XP_013366195.1  mothers against decapentaplegic homolog 4 isoform X1

    UniProtKB/TrEMBL
    A0A8C2YPC8
    Related
    ENSCLAP00000013454.1, ENSCLAT00000013608.1
    Conserved Domains (2) summary
    cd10492
    Location:14 → 138
    MH1_SMAD_4; N-terminal Mad Homology 1 (MH1) domain in SMAD4
    cd10498
    Location:320 → 541
    MH2_SMAD_4; C-terminal Mad Homology 2 (MH2) domain in SMAD4

RNA

  1. XR_001232810.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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