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Camk2a calcium/calmodulin dependent protein kinase II alpha [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102017328, updated on 18-Sep-2024

Summary

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Gene symbol
Camk2a
Gene description
calcium/calmodulin dependent protein kinase II alpha
See related
Ensembl:ENSCLAG00000012010
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955415.1 (4247307..4307402)

NW_004955415.1Genomic Context describing neighboring genes Neighboring gene treacle ribosome biogenesis factor 1 Neighboring gene arylsulfatase family member I Neighboring gene solute carrier family 6 member 7 Neighboring gene caudal type homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955415.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium/calmodulin-dependent protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium/calmodulin-dependent protein kinase type II subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955415.1 Reference ChiLan1.0 Primary Assembly

    Range
    4247307..4307402
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005380581.2 → XP_005380638.1  calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1

    See identical proteins and their annotated locations for XP_005380638.1

    UniProtKB/TrEMBL
    A0A8C2VLP3, A0A8C2VS14
    Related
    ENSCLAP00000017484.1, ENSCLAT00000017656.1
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:357 → 484
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  2. XM_005380582.2 → XP_005380639.1  calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X2

    See identical proteins and their annotated locations for XP_005380639.1

    UniProtKB/TrEMBL
    A0A8C2VLM7, A0A8C2VLP3
    Related
    ENSCLAP00000017485.1, ENSCLAT00000017657.1
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:346 → 473
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain
Nucleotide Protein
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