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Alcam activated leukocyte cell adhesion molecule [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102009083, updated on 10-Mar-2024

Summary

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Gene symbol
Alcam
Gene description
activated leukocyte cell adhesion molecule
See related
Ensembl:ENSCLAG00000011855
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955427.1 (6494657..6544668)

NW_004955427.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106148730 Neighboring gene uncharacterized LOC102008873 Neighboring gene uncharacterized LOC106148695 Neighboring gene Cbl proto-oncogene B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955427.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD166 antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955427.1 Reference ChiLan1.0 Primary Assembly

    Range
    6494657..6544668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005386343.2 → XP_005386400.2  CD166 antigen

    UniProtKB/TrEMBL
    A0A8C2YR67
    Related
    ENSCLAP00000017272.1, ENSCLAT00000017441.1
    Conserved Domains (5) summary
    smart00406
    Location:38 → 113
    IGv; Immunoglobulin V-Type
    smart00410
    Location:255 → 329
    IG_like; Immunoglobulin like
    pfam08205
    Location:137 → 231
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:256 → 313
    Ig_3; Immunoglobulin domain
    cl11960
    Location:415 → 488
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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