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Pus7l pseudouridine synthase 7 like [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102006048, updated on 10-Mar-2024

Summary

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Gene symbol
Pus7l
Gene description
pseudouridine synthase 7 like
See related
Ensembl:ENSCLAG00000002416
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955500.1 (2992767..3010129, complement)

NW_004955500.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 20 Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene interleukin 1 receptor associated kinase 4 Neighboring gene twinfilin actin binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955500.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pseudouridylate synthase 7 homolog-like protein
Names
pseudouridylate synthase 7 homolog (S. cerevisiae)-like
pseudouridylate synthase 7 like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955500.1 Reference ChiLan1.0 Primary Assembly

    Range
    2992767..3010129 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005406586.2 → XP_005406643.1  pseudouridylate synthase 7 homolog-like protein

    See identical proteins and their annotated locations for XP_005406643.1

    UniProtKB/TrEMBL
    A0A8C2URT7, A0A8C2UU73
    Related
    ENSCLAP00000003375.1, ENSCLAT00000003443.1
    Conserved Domains (2) summary
    cd02576
    Location:296 → 694
    PseudoU_synth_ScPUS7; Pseudouridine synthase, TruD family
    cl00130
    Location:22 → 47
    PseudoU_synth; Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi)
Nucleotide Protein
Heading Accession and Version

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