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Otulin OTU deubiquitinase with linear linkage specificity [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102004732, updated on 10-Mar-2024

Summary

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Gene symbol
Otulin
Gene description
OTU deubiquitinase with linear linkage specificity
See related
Ensembl:ENSCLAG00000012182
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Also known as
Fam105b
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955426.1 (3953852..3982532)

NW_004955426.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106148682 Neighboring gene OTU deubiquitinase with linear linkage specificity like Neighboring gene uncharacterized LOC106148675 Neighboring gene ANKH inorganic pyrophosphate transport regulator Neighboring gene methionine aminopeptidase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955426.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein linear deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin thioesterase otulin
Names
family with sequence similarity 105, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955426.1 Reference ChiLan1.0 Primary Assembly

    Range
    3953852..3982532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013514962.1 → XP_013370416.1  ubiquitin thioesterase otulin

    UniProtKB/TrEMBL
    A0A8C2VU87
    Related
    ENSCLAP00000017758.1, ENSCLAT00000017933.1
    Conserved Domains (1) summary
    pfam16218
    Location:78 → 341
    Peptidase_C101; Peptidase family C101
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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