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Abcc8 ATP binding cassette subfamily C member 8 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101999837, updated on 8-Mar-2024

Summary

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Gene symbol
Abcc8
Gene description
ATP binding cassette subfamily C member 8
See related
Ensembl:ENSMOCG00000013816
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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See Abcc8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
39
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) Unplaced Scaffold NW_004949112.1 (176005..246317, complement)

NW_004949112.1Genomic Context describing neighboring genes Neighboring gene band 4.1-like protein 5 pseudogene Neighboring gene potassium inwardly rectifying channel subfamily J member 11 Neighboring gene USH1 protein network component harmonin Neighboring gene otogelin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004949112 Unplaced Scaffold Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfonylurea receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family C member 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NW_004949112.1 Reference MicOch1.0

    Range
    176005..246317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026789080.1 → XP_026644881.1  ATP-binding cassette sub-family C member 8 isoform X1

    UniProtKB/TrEMBL
    A0A8J6KN16
    Conserved Domains (1) summary
    cl26602
    Location:224 → 1580
    SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]

  2. XM_013353678.2 → XP_013209132.1  ATP-binding cassette sub-family C member 8 isoform X4

    UniProtKB/TrEMBL
    A0A8J6KN16
    Conserved Domains (4) summary
    TIGR01271
    Location:223 → 1581
    CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
    pfam00664
    Location:1023 → 1294
    ABC_membrane; ABC transporter transmembrane region
    cl00549
    Location:375 → 590
    ABC_membrane; ABC transporter transmembrane region
    cl21455
    Location:1342 → 1581
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  3. XM_005366746.3 → XP_005366803.1  ATP-binding cassette sub-family C member 8 isoform X2

    UniProtKB/TrEMBL
    A0A8J6KN16
    Related
    ENSMOCP00000014291.1, ENSMOCT00000018049.1
    Conserved Domains (4) summary
    TIGR01271
    Location:223 → 1582
    CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
    pfam00664
    Location:1024 → 1295
    ABC_membrane; ABC transporter transmembrane region
    cl00549
    Location:375 → 590
    ABC_membrane; ABC transporter transmembrane region
    cl21455
    Location:1343 → 1582
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  4. XM_026789081.1 → XP_026644882.1  ATP-binding cassette sub-family C member 8 isoform X3

    UniProtKB/TrEMBL
    A0A8J6KN16
    Conserved Domains (1) summary
    cl26602
    Location:224 → 1579
    SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]

  5. XM_026789082.1 → XP_026644883.1  ATP-binding cassette sub-family C member 8 isoform X5

    UniProtKB/TrEMBL
    A0A8J6KN16
    Conserved Domains (1) summary
    cl26602
    Location:224 → 1570
    SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Nucleotide Protein
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