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Rtn1 reticulon 1 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101998721, updated on 8-Mar-2024

Summary

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Gene symbol
Rtn1
Gene description
reticulon 1
See related
Ensembl:ENSMOCG00000017923
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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See Rtn1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) 1 NC_022009.1 (9086565..9302301)

Chromosome 1 - NC_022009.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 9 Neighboring gene U6 spliceosomal RNA Neighboring gene coiled-coil domain containing 175 Neighboring gene JNK1/MAPK8 associated membrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022009.1 Chromosome 1 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum tubular network formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
reticulon-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022009.1 Reference MicOch1.0

    Range
    9086565..9302301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013346088.2 → XP_013201542.2  reticulon-1 isoform X1

    Conserved Domains (2) summary
    pfam02453
    Location:594 → 756
    Reticulon
    cl28033
    Location:287 → 575
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  2. XM_005343173.3 → XP_005343230.1  reticulon-1 isoform X2

    See identical proteins and their annotated locations for XP_005343230.1

    Related
    ENSMOCP00000020162.1, ENSMOCT00000023982.1
    Conserved Domains (1) summary
    pfam02453
    Location:23 → 185
    Reticulon
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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