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Ddx31 DEAD-box helicase 31 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101989728, updated on 8-Mar-2024

Summary

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Gene symbol
Ddx31
Gene description
DEAD-box helicase 31
See related
Ensembl:ENSMOCG00000020938
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
20
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) 4 NC_022011.1 (48230746..48302399, complement)

Chromosome 4 - NC_022011.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene BarH like homeobox 1 Neighboring gene general transcription factor IIIC subunit 4 Neighboring gene 5S ribosomal RNA Neighboring gene adenylate kinase 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022011.1 Chromosome 4 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX31

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022011.1 Reference MicOch1.0

    Range
    48230746..48302399 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013355143.2 → XP_013210597.1  probable ATP-dependent RNA helicase DDX31

    UniProtKB/TrEMBL
    A0A8J6KPI5
    Related
    ENSMOCP00000024558.1, ENSMOCT00000028420.1
    Conserved Domains (4) summary
    COG0513
    Location:124 → 668
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd00268
    Location:128 → 340
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
    pfam00271
    Location:388 → 510
    Helicase_C; Helicase conserved C-terminal domain
    pfam13959
    Location:580 → 641
    DUF4217; Domain of unknown function (DUF4217)
Nucleotide Protein
Heading Accession and Version

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