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Fsd1l fibronectin type III and SPRY domain containing 1 like [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101988278, updated on 8-Mar-2024

Summary

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Gene symbol
Fsd1l
Gene description
fibronectin type III and SPRY domain containing 1 like
See related
Ensembl:ENSMOCG00000022827
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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See Fsd1l in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
14
Annotation release Status Assembly LG Location
102 current MicOch1.0 (GCF_000317375.1) LG5 NC_022031.1 (47208359..47274101)

Linkage Group LG5 - NC_022031.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily A member 1 Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 44 member 1 Neighboring gene fukutin Neighboring gene TAL bHLH transcription factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022031.1 Chromosome LG5 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FSD1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022031.1 Reference MicOch1.0

    Range
    47208359..47274101
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026786676.1 → XP_026642477.1  FSD1-like protein isoform X3

    Related
    ENSMOCP00000027293.1, ENSMOCT00000031196.1
    Conserved Domains (3) summary
    cd00063
    Location:165 → 265
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd12901
    Location:270 → 484
    SPRY_PRY_FSD1; Fibronectin type III and SPRY containing 1 (FSD1) domain includes PRY at the N-terminus
    cl25407
    Location:4 → 130
    ClassIIa_HDAC_Gln-rich-N; Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9)

  2. XM_013351950.2 → XP_013207404.1  FSD1-like protein isoform X1

    Related
    ENSMOCP00000027292.1, ENSMOCT00000031195.1
    Conserved Domains (3) summary
    smart00502
    Location:4 → 130
    BBC; B-Box C-terminal domain
    cd00063
    Location:165 → 265
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd12901
    Location:270 → 473
    SPRY_PRY_FSD1; Fibronectin type III and SPRY containing 1 (FSD1) domain includes PRY at the N-terminus

  3. XM_013351951.2 → XP_013207405.1  FSD1-like protein isoform X2

    Conserved Domains (3) summary
    smart00502
    Location:4 → 130
    BBC; B-Box C-terminal domain
    cd00063
    Location:165 → 265
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd12901
    Location:270 → 472
    SPRY_PRY_FSD1; Fibronectin type III and SPRY containing 1 (FSD1) domain includes PRY at the N-terminus
Nucleotide Protein
Heading Accession and Version

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