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Brd4 bromodomain containing 4 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101987245, updated on 8-Mar-2024

Summary

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Gene symbol
Brd4
Gene description
bromodomain containing 4
See related
Ensembl:ENSMOCG00000019710
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: LG3
Exon count:
20
Annotation release Status Assembly LG Location
102 current MicOch1.0 (GCF_000317375.1) LG3 NC_022029.1 (28546233..28623475)

Linkage Group LG3 - NC_022029.1Genomic Context describing neighboring genes Neighboring gene A-kinase anchoring protein 8 like Neighboring gene A-kinase anchoring protein 8 Neighboring gene U6 spliceosomal RNA Neighboring gene epoxide hydrolase 3 Neighboring gene notch receptor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022029.1 Chromosome LG3 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysine-acetylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bromodomain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022029.1 Reference MicOch1.0

    Range
    28546233..28623475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013351330.2 → XP_013206784.1  bromodomain-containing protein 4 isoform X1

    Related
    ENSMOCP00000022798.1, ENSMOCT00000026645.1
    Conserved Domains (4) summary
    cd05497
    Location:58 → 164
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:354 → 455
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17035
    Location:610 → 674
    BET; Bromodomain extra-terminal - transcription regulation
    pfam17105
    Location:1355 → 1398
    BRD4_CDT; C-terminal domain of bromodomain protein 4

  2. XM_005360704.3 → XP_005360761.1  bromodomain-containing protein 4 isoform X2

    Conserved Domains (4) summary
    cd05497
    Location:58 → 164
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:354 → 455
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17035
    Location:610 → 674
    BET; Bromodomain extra-terminal - transcription regulation
    pfam17105
    Location:1322 → 1365
    BRD4_CDT; C-terminal domain of bromodomain protein 4

  3. XM_026785874.1 → XP_026641675.1  bromodomain-containing protein 4 isoform X3

    Conserved Domains (3) summary
    cd05497
    Location:58 → 164
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:354 → 455
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17035
    Location:610 → 674
    BET; Bromodomain extra-terminal - transcription regulation

  4. XM_013351332.2 → XP_013206786.1  bromodomain-containing protein 4 isoform X4

    Conserved Domains (3) summary
    cd05497
    Location:58 → 164
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:354 → 455
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17035
    Location:610 → 674
    BET; Bromodomain extra-terminal - transcription regulation

  5. XM_013351331.2 → XP_013206785.1  bromodomain-containing protein 4 isoform X1

    Conserved Domains (4) summary
    cd05497
    Location:58 → 164
    Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    cd05498
    Location:354 → 455
    Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
    pfam17035
    Location:610 → 674
    BET; Bromodomain extra-terminal - transcription regulation
    pfam17105
    Location:1355 → 1398
    BRD4_CDT; C-terminal domain of bromodomain protein 4
Nucleotide Protein
Heading Accession and Version

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