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Hdgfl3 HDGF like 3 [ Microtus ochrogaster (prairie vole) ]

Gene ID: 101981567, updated on 8-Mar-2024

Summary

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Gene symbol
Hdgfl3
Gene description
HDGF like 3
See related
Ensembl:ENSMOCG00000010600
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus ochrogaster
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
6
Annotation release Status Assembly Chr Location
102 current MicOch1.0 (GCF_000317375.1) 22 NC_022023.1 (12174021..12226089, complement)

Chromosome 22 - NC_022023.1Genomic Context describing neighboring genes Neighboring gene BTB domain containing 1 Neighboring gene uncharacterized LOC113457335 Neighboring gene transmembrane 6 superfamily member 1 Neighboring gene basonuclin zinc finger protein 1 Neighboring gene SH3 domain containing GRB2 like 3, endophilin A3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_022023.1 Chromosome 22 Reference MicOch1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hepatoma-derived growth factor-related protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus ochrogaster Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MicOch1.0

Genomic

  1. NC_022023.1 Reference MicOch1.0

    Range
    12174021..12226089 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005357674.3 → XP_005357731.1  hepatoma-derived growth factor-related protein 3

    See identical proteins and their annotated locations for XP_005357731.1

    UniProtKB/TrEMBL
    A0A8J6KRM1
    Related
    ENSMOCP00000010374.1, ENSMOCT00000013600.1
    Conserved Domains (1) summary
    cd05834
    Location:7 → 91
    HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...
Nucleotide Protein
Heading Accession and Version

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