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Usp6nl USP6 N-terminal like [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101968501, updated on 8-Mar-2024

Summary

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Gene symbol
Usp6nl
Gene description
USP6 N-terminal like
Locus tag
H1C71_027444
See related
EnsemblRapid:ENSSTOG00015007760
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024409344.1 (27470845..27641483)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936484.1 (3635966..3802906)

NW_024409344.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene enoyl-CoA hydratase domain containing 3 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC120887545 Neighboring gene CUGBP Elav-like family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
USP6 N-terminal-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024409344.1 Reference HiC_Itri_2 Primary Assembly

    Range
    27470845..27641483
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013356412.3 → XP_013211866.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    I3LYU6
    Related
    ENSSTOP00015009529.1, ENSSTOT00015010481.1
    Conserved Domains (1) summary
    smart00164
    Location:97 → 312
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  2. XM_021723019.2 → XP_021578694.1  USP6 N-terminal-like protein isoform X1

    Related
    ENSSTOP00015009526.1, ENSSTOT00015010478.1
    Conserved Domains (1) summary
    smart00164
    Location:120 → 335
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

  3. XM_021723020.2 → XP_021578695.1  USP6 N-terminal-like protein isoform X2

    Conserved Domains (1) summary
    smart00164
    Location:114 → 329
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
Nucleotide Protein
Heading Accession and Version

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