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Rab20 RAB20, member RAS oncogene family [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101964902, updated on 8-Mar-2024

Summary

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Gene symbol
Rab20
Gene description
RAB20, member RAS oncogene family
Locus tag
H1C71_014975
See related
EnsemblRapid:ENSSTOG00015003858
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404945.1 (193687535..193716912, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936472.1 (2234826..2264613)

NW_024404945.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120888529 Neighboring gene collagen type IV alpha 1 chain Neighboring gene collagen type IV alpha 2 chain Neighboring gene 60S ribosomal protein L27-like Neighboring gene NAD(P)HX dehydratase Neighboring gene cysteinyl-tRNA synthetase 2, mitochondrial Neighboring gene inhibitor of growth family member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404945.1 Reference HiC_Itri_2 Primary Assembly

    Range
    193687535..193716912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005316987.4 → XP_005317044.1  ras-related protein Rab-20

    UniProtKB/TrEMBL
    I3MB98
    Related
    ENSSTOP00015004606.1, ENSSTOT00015005128.1
    Conserved Domains (1) summary
    cd04126
    Location:7 → 233
    Rab20; Rab GTPase family 20 (Rab20)
Nucleotide Protein
Heading Accession and Version

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