U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Camk2a calcium/calmodulin dependent protein kinase II alpha [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101963322, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
Camk2a
Gene description
calcium/calmodulin dependent protein kinase II alpha
Locus tag
H1C71_002423
See related
EnsemblRapid:ENSSTOG00015015293
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024407213.1 (143064159..143126577)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936504.1 (4636863..4700887)

NW_024407213.1Genomic Context describing neighboring genes Neighboring gene treacle ribosome biogenesis factor 1 Neighboring gene arylsulfatase family member I Neighboring gene solute carrier family 6 member 7 Neighboring gene caudal type homeobox 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium/calmodulin-dependent protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
calcium/calmodulin-dependent protein kinase type II subunit alpha

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024407213.1 Reference HiC_Itri_2 Primary Assembly

    Range
    143064159..143126577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005324162.4 → XP_005324219.1  calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X1

    See identical proteins and their annotated locations for XP_005324219.1

    UniProtKB/TrEMBL
    I3MCL2
    Related
    ENSSTOP00015018750.1, ENSSTOT00015020549.1
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:357 → 484
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  2. XM_040273001.1 → XP_040128935.1  calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X3

    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:346 → 473
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  3. XM_005324163.4 → XP_005324220.1  calcium/calmodulin-dependent protein kinase type II subunit alpha isoform X2

    See identical proteins and their annotated locations for XP_005324220.1

    UniProtKB/TrEMBL
    A0A287DDG1
    Related
    ENSSTOP00015018753.1, ENSSTOT00015020555.1
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:346 → 473
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.