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Rufy2 RUN and FYVE domain containing 2 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101961908, updated on 8-Mar-2024

Summary

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Gene symbol
Rufy2
Gene description
RUN and FYVE domain containing 2
Locus tag
H1C71_001122
See related
EnsemblRapid:ENSSTOG00015011079
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024407213.1 (61398165..61441108)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936521.1 (9891697..9934407)

NW_024407213.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 16 Neighboring gene DNA replication helicase/nuclease 2 Neighboring gene uncharacterized LOC120885346 Neighboring gene U4 spliceosomal RNA Neighboring gene heterogeneous nuclear ribonucleoprotein H3 Neighboring gene phenazine biosynthesis like protein domain containing Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RUN and FYVE domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024407213.1 Reference HiC_Itri_2 Primary Assembly

    Range
    61398165..61441108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040272261.1 → XP_040128195.1  RUN and FYVE domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    I3MHU0
    Related
    ENSSTOP00015013612.1, ENSSTOT00015014916.1
    Conserved Domains (3) summary
    smart00593
    Location:89 → 151
    RUN; domain involved in Ras-like GTPase signaling
    TIGR02168
    Location:173 → 490
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cl28890
    Location:518 → 588
    FYVE_like_SF; FYVE domain like superfamily

  2. XM_005325971.4 → XP_005326028.1  RUN and FYVE domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    I3MHU0
    Conserved Domains (3) summary
    COG1196
    Location:243 → 541
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl28890
    Location:567 → 637
    FYVE_like_SF; FYVE domain like superfamily
    pfam02759
    Location:78 → 199
    RUN; RUN domain

  3. XM_021726785.2 → XP_021582460.1  RUN and FYVE domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    I3MHU0
    Conserved Domains (3) summary
    COG1196
    Location:243 → 540
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl28890
    Location:566 → 636
    FYVE_like_SF; FYVE domain like superfamily
    pfam02759
    Location:78 → 199
    RUN; RUN domain

  4. XM_021726786.2 → XP_021582461.1  RUN and FYVE domain-containing protein 2 isoform X4

    UniProtKB/TrEMBL
    I3MHU0
    Conserved Domains (2) summary
    COG1196
    Location:261 → 551
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:78 → 199
    RUN; RUN domain

  5. XM_040272262.1 → XP_040128196.1  RUN and FYVE domain-containing protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A287D146
    Conserved Domains (2) summary
    smart00593
    Location:138 → 200
    RUN; domain involved in Ras-like GTPase signaling
    COG1196
    Location:226 → 477
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  6. XM_040272263.1 → XP_040128197.1  RUN and FYVE domain-containing protein 2 isoform X7

    UniProtKB/TrEMBL
    A0A287D146
    Conserved Domains (2) summary
    smart00593
    Location:138 → 200
    RUN; domain involved in Ras-like GTPase signaling
    COG1196
    Location:243 → 434
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  7. XM_021726787.2 → XP_021582462.1  RUN and FYVE domain-containing protein 2 isoform X6

    UniProtKB/TrEMBL
    A0A287D146
    Related
    ENSSTOP00015013607.1, ENSSTOT00015014911.1
    Conserved Domains (2) summary
    COG1196
    Location:243 → 447
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam02759
    Location:78 → 199
    RUN; RUN domain
Nucleotide Protein
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