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Osbp oxysterol binding protein [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101956774, updated on 11-Apr-2024

Summary

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Gene symbol
Osbp
Gene description
oxysterol binding protein
Locus tag
H1C71_008534
See related
EnsemblRapid:ENSSTOG00015018530
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404947.1 (13004370..13035064)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936581.1 (3118198..3148882)

NW_024404947.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 10V1-like Neighboring gene PAT1 homolog 1, processing body mRNA decay factor Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene transfer RNA lysine (anticodon UUU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oxysterol-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404947.1 Reference HiC_Itri_2 Primary Assembly

    Range
    13004370..13035064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005331547.2 → XP_005331604.1  oxysterol-binding protein 1

    UniProtKB/TrEMBL
    I3NDC6
    Related
    ENSSTOP00015022861.1, ENSSTOT00015024924.1
    Conserved Domains (2) summary
    pfam01237
    Location:293 → 668
    Oxysterol_BP; Oxysterol-binding protein
    cl17171
    Location:1 → 64
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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