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Znf688 zinc finger protein 688 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101955867, updated on 8-Mar-2024

Summary

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Gene symbol
Znf688
Gene description
zinc finger protein 688
Locus tag
H1C71_029258
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024409344.1 (124899008..124901714, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936501.1 (12996868..12999713, complement)

NW_024409344.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 764 Neighboring gene uncharacterized LOC110597986 Neighboring gene uncharacterized LOC120887294 Neighboring gene zinc finger protein 689 Neighboring gene proline rich 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 688

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024409344.1 Reference HiC_Itri_2 Primary Assembly

    Range
    124899008..124901714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013357883.3 → XP_013213337.1  zinc finger protein 688 isoform X2

    UniProtKB/TrEMBL
    A0A287D9C3
    Conserved Domains (4) summary
    smart00349
    Location:26 → 75
    KRAB; krueppel associated box
    sd00017
    Location:146 → 166
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:144 → 166
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:159 → 183
    zf-H2C2_2; Zinc-finger double domain

  2. XM_005323855.4 → XP_005323912.1  zinc finger protein 688 isoform X1

    UniProtKB/TrEMBL
    I3MKP7
    Conserved Domains (4) summary
    smart00349
    Location:26 → 86
    KRAB; krueppel associated box
    sd00017
    Location:184 → 204
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:182 → 204
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:197 → 221
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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